Tutorial

• 00 - Setup
• 01 - Read
• 02 - QC
  • 02a - Slide QC
    • Visualizing Field of View edge-effects
  • 02b - gene QC
  • 02c - cell QC
• 03 - Dimensionality reduction
• 04 - Clustering
• 05 - Differential expression analysis
  • 05a - using detection rates & pbGLM
  • 05b - using pyDESeq2